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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7593928 chr2:101103109 T/A LOC285359 chr3:101431278-101432259:+ 0.33 6.48 2.29E-10 Box Plot
THCA rs7594252 chr2:132209380 C/T CCDC74B chr2:130896860-130902707:- 0.38 6.63 9.31E-11 Box Plot
THCA rs7594904 chr2:101184651 T/C LOC285359 chr3:101431278-101432259:+ 0.56 13.7 2.83E-36 Box Plot
THCA rs7594990 chr2:101201669 C/T LOC285359 chr3:101431278-101432259:+ 0.35 6.98 1.02E-11 Box Plot
THCA rs7596439 chr2:101084936 T/C LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs7596661 chr2:113026189 C/T RGPD5 chr2:110550335-110615272:+ -0.47 -6.9 1.62E-11 Box Plot
THCA rs7596851 chr2:101085481 A/G LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs7597254 chr2:101147080 G/A LOC285359 chr3:101431278-101432259:+ 0.34 6.33 5.69E-10 Box Plot
THCA rs75979451 chr14:39942342 A/G LOC647288 chr13:75811890-75814517:- -0.44 -7.14 3.55E-12 Box Plot
THCA rs7598078 chr2:101155044 T/C LOC285359 chr3:101431278-101432259:+ 0.36 6.87 1.99E-11 Box Plot
THCA rs75983367 chr2:132202776 T/C CCDC74B chr2:130896860-130902707:- 0.38 6.55 1.51E-10 Box Plot
THCA rs7598339 chr2:101155275 T/C LOC285359 chr3:101431278-101432259:+ 0.36 6.87 1.99E-11 Box Plot
THCA rs7598498 chr2:132243941 A/G TUBA3E chr2:130949316-130956034:- 0.5 6.04 3.03E-9 Box Plot
THCA rs7598867 chr2:111748113 A/G LOC442454 chrX:56763221-56764017:- -0.23 -6.34 5.4E-10 Box Plot
THCA rs7599321 chr2:101085113 T/G LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot